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Calonectria blight of containerized nandina nursery stock

ID

SPES-784NP

Authors as Published

Authored by Devin Bily, Plant Pathologist, Virginia Department of Agriculture and Consumer Services; Chuanxue Hong, Professor and Extension Plant Pathologist, Hampton Roads AREC, Virginia Tech; Lina Rodriguez Salamanca, Instructor, Diagnostician and Manager, Plant Disease Clinic, School of Plant and Environmental Sciences, Virginia Tech; and Kameron Kilday, Diagnostician, Plant Disease Clinic, School of Plant and Environmental Sciences, Virginia Tech

Introduction

Calonectria diseases cause significant economic losses in the ornamental horticultural industry worldwide (Aiello et al. 2022). In 2024 and 2025, Calonectria spp. were isolated from leaf spots, stem cankers, stem dieback, and necrotic roots of containerized Nandina domestica (nandina/heavenly bamboo) nursery stock from 11 nurseries in 11 Virginia counties. The fungus was confirmed in 7 N. domestica cultivars: Blush Pink, Fire Power, Gulf Stream, Harbour Dwarf, Lemon Lime, Moon Bay, and Obsession.

Symptoms

Calonectria spp. cause leaf spots, defoliation, stem cankers, and stem dieback of containerized nandina nursery stock, mostly in the inner and lower portions of the plant canopy (Fig. 1). Leaf spots begin as dark brown, circular to blotchy lesions sometimes with a yellow or red halo (Fig. 2). Affected leaves tend to fall off and fill the container. Stem cankers begin as small, black, slightly sunken lesions, often speckled along the stem and collar, but can also encircle the diameter of small stems and develop a red halo (Fig. 3). The fungus also causes stems and panicles to die back (Fig. 4). In a few nurseries, extensive blight symptoms were observed on sapling plants propagated in plugs (Fig. 5). The pathogen has been isolated infrequently from symptomatic roots, however, its role as a root rot pathogen on nandina is unclear. This disease may look like a variety of other diseases and pathogens, including Colletotrichum and Fusarium species, which were often isolated from plants infected with Calonectria.

Three-panel photograph showing potted nandina plants experiencing lower crown defoliation from Calonectria blight. Top panel features two nandina plants with significant loss of lower foliage, middle panel shows a large group of nandina plants with severe defoliation and stunting, and bottom panel displays a nandina plant with a bare lower crown and a pot full of fallen leaves.
Fig. 1 - Containerized Nandina ‘Lemon Lime’ nursery stock with lower crown defoliation and significant dieback. Infected leaves of Nandina ‘Gulf Stream’ that have fallen in the pot.
Top panel of a two panel photograph, showing a group of nandina leaves with leaf spots with a black center and a red halo caused by the calonectria fungus.
Bottom panel of a two panel photograph showing the underside of a nandina leaf. The leaf has black and brown centered leaf spots with a red halo, and the white sporulation of the calonectria fungus can be seen in the center of the spots.
Fig. 2 - Dark brown leaf spots with a red halo and white sporulation fruiting from underneath the leaf.
The top panel of a two panel figure. This panel shows black cankers caused by the calonectria fungus on the branches of a nandina plant.
The bottom panel of a two panel figure. This panel shows a closeup of disolored and cankered nandina branches caused by the calonectria fungus.
Fig. 3 - Large stem cankers on Nandina ‘Moon Bay’ and ‘Lemon Lime’ with a red halo.
This figure shows stem dieback on a nandina plant. The stems are brown and black and have blunted tips where the growing leaves and buds have died and fallen off.
Fig. 4 - Stem dieback on Nandina ‘Obsession'.
This figure shows a young nandina sapling with many of the lower stems dying back. These stems are blacked with blunt ends and few to no leaves.
Fig. 5 - A Nandina ‘Lemon Lime’ sapling propagated in a plug with severe crown dieback.

Disease Cycle

There is limited research on the disease cycle of Calonectria blight on nandina; however, all diseases caused by Calonectria fungi are polycyclic, meaning they have repeated infection cycles within one crop season (Aiello et al. 2022). The pathogen may overwinter in blighted plant tissues. It also may overwinter in soil and plant debris as resting structures called microsclerotia, which allow the fungus to survive for years until the presence of a host, moisture, and warm conditions initiate germination (Aiello et al. 2022).

Overwintered microsclerotia germinate to produce spores, which initiate primary infection, and this usually occurs in the seedling or propagation stage from infested potting media. Liners purchased by a wholesale nursery can already be infected at the propagation nursery, even if symptoms are not present.

Secondary infection occurs during production with inoculum, i.e., spores borne from infected plant parts or plant debris. This infection could be extensive during warm, humid conditions. The spores are sticky and are dispersed by water splashing, contaminated equipment and tools, and infected plant debris (Aiello et al. 2022).

Control Options

Cultural Control

Preventing the fungus from entering the production system is critical to successfully managing all Calonectria diseases. Ideally, propagate stock from seed or tissue culture, as cuttings can harbor inoculum. This also includes not reusing potting media, as this is a common pathway of introducing disease into healthy plant stock. Use non-infested or sterilized planting media that is suitable for nandina, which prefers well-drained soil with a pH of 3.7 to 6.4 (Niemiera 2024). Soilless premixes of peat, perlite, and vermiculite are readily available and generally low in weed-seed contaminants and harmful microorganisms, making them an excellent choice for seedling propagation. Composted pine bark is a good growing substrate for containerized nandina production. It is readily available in Virginia, can be screened to a variety of particle sizes, is generally disease-free, and has a pH of 3.8 to 4.5 (Kaderabek et al. 2017). If reusing containers, remove all residual dirt and debris then disinfest by soaking in a 10% bleach solution for at least 10 minutes.

To reduce the spread of secondary inoculum:

  • Remove all fallen plant debris in production areas, especially leaves that reside in containers. Do not use a leaf blower to remove the debris, as this may disperse spores.
  • After soil and debris has been removed from tools, floors, and bench tops, a sanitizer can be sprayed to kill inoculum. Table 1 lists effective sanitizers for Calonectria pathogens.
  • To reduce water splashing into the crown of plants, use drip irrigation instead of a sprinkler. If a sprinkler is used, irrigate during morning hours to reduce periods of leaf wetness.
  • A ½-inch layer of parboiled rice hulls can be used to cover the top portion of the root ball to reduce spores from splashing up into the crown.
  • Space containers 6 inches apart to increase air circulation and reduce pathogen dispersal between plants from splashing.
  • A fan at low speed can be used in hoop houses to increase airflow, reduce leaf wetness, and dry standing water.
  • Make sure the foliage is dry before pruning stock, disinfect the tool with a sanitizer product between plants, and remove pruned foliage afterwards.

Table 1. Sanitizers recommended for Calonectria diseases in nurseries1

Active ingredient

Example of brand name2

Concentration3

Contact time/application

ethanol

Sanihol ST

70% or greater for clean non-porous surfaces and tools.

Apply to the surface and allow to air-dry. At least 10 sec. to sanitize tools, 10 min. to disinfect.
sodium hypochlorite (5.25% or 8.25%) Clorox

12.8 oz/gal. of 5.25% bleach.

9.1 oz/gal. of 8.25% bleach.

Must be prepared fresh.

5–10 min. for clean surfaces. At least 10 sec to sanitize tools (will corrode metal).
hydrogen dioxide Zerotol

 0.85 oz/gal. for clean non-porous surfaces and tools.

2.5 oz/gal. for unclean non-porous surfaces and tools.

1–10 min. to disinfect surfaces and tools.
hydrogen peroxide, peroxyacetic acid, and octanoic acid Xeroton

0.09 oz/gal. for clean non-porous surfaces and tools.

0.5 oz/gal. for unclean non-porous surfaces and tools.

10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.
phenolic compounds (O-benzyl-p-chlorophenol) Lysol Concentrate Disinfectant

1 oz/gal. for clean non-porous surfaces.

2 oz/gal. for unclean non-porous surfaces and tools.

10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.
octyl decyl dimethyl + dioctyl dimethyl + didecyl dimethyl + dimethyl benzyl ammonium chloride Simple Green D Pro 5

2 oz/gal. for clean non-porous surfaces.

8 oz/gal. for unclean non-porous surfaces and tools.

10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.
2-propanol + didecyl dimethyl ammonium chloride KleenGrow 1 oz/gal. for clean non-porous surfaces and use on tools. 10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.
dimethyl benzyl + dimethyl ethylbenzyl ammonium chloride GreenShield

0.3 oz/gal. for clean non-porous surfaces.

0.6 oz/gal. for unclean non-porous surfaces and tools.

10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.
potassium peroxymonosulfate + sodium chloride Virkon S

1.3 oz/gal. for clean, porous, and non-porous surfaces.

2.6 oz/gal. for unclean, porous, and non-porous surfaces and tools.

10 min. to disinfect surfaces. At least 10 sec. to sanitize tools, 10 min. to disinfect.

1: Sources of efficacy information: Virginia Cooperative Extension Boxwood Blight Task Force, https://ext.vt.edu/agriculture/commercial- horticulture/boxwood-blight.html; LaMondia, J.A., Cowles, R.S., Shishkoff, N. 2025. The Effects of Sanitizers on Calonectria pseudonaviculata and C. henricotiae Conidia and Microsclerotia Viability. Jour. of Enviro. Hort. 43: 83-90; Bika, R., Copes, W., and Baysal-Gurel, F. 2021. Comparative Performance of Sanitizers in Managing Plant-to-Plant Transfer and Postharvest Infection of Calonectria pseudonaviculata and Pseudonectria foliicola on Boxwood. Plant Disease 105: 2809-2821.

2: Always follow the manufacturer’s instructions.

3: Lethal concentrations for fungal spores only, not microsclerotia in plant debris. Therefore, it is very important to wash off surface soil and/or debris before proceeding with any sanitizing procedure.

Chemical Control

A variety of fungicides have been demonstrated to be effective against other Calonectria diseases (Table 2). Systemic fungicides are absorbed into the plant and moved internally for lasting protection.‌

Contact fungicides stay on the surface for preventive, short-term defense. Always follow manufacturer’s instructions, apply fungicides before symptoms appear, and if using a contact fungicide, target the lower and inner crown of plants.

It is important to rotate FRAC code fungicides with different modes of action to minimize the risk of pathogen resistance development. Specifically, rotating applications of boscalid + pyraclostrobin and cyprodinil + fludioxonil are highly effective in reducing leaf and stem infections caused by Calonectria fungi (Cinquerrui et al. 2016).

Biological Control

Agents such as Bacillus, Trichoderma, or Streptomyces have been combined with fungicides to improve protection, although, when used independently, were not effective in controlling disease (Cinquerrui et al. 2016).

Table 2. Fungicides recommended for control of Calonectria diseases in nurseries1

Active Ingredient2

Trade Name

FRAC Group3

Application Mode

boscalid + pyraclostrobin

Pristine, Signum

7+11

systemic

chlorothalonil

Daconil, Bravo

M5

contact

chlorothalonil + thiophanate methyl

Spectro 90WDG

M5+1

contact + systemic

cyprodinil + fludioxonil

Alterity, Switch

9+12

systemic + contact

fludioxonil

Medallion, Scholar

12

contact

fluopyram

Luna Privilege

7

systemic

mancozeb

Dithane, Fore 80 WP Rainshield

M3

contact

myclobutanil

Eagle 20EW, Rally 40 WSP

3

systemic

propiconazole

Banner MAXX, Procon-Z

3

systemic

propiconazole + chlorothalonil

Concert, Concert II

3+M5

systemic + contact

1: Results can vary depending on environmental conditions, formulation of a fungicide, and application method and timing. Always follow the manufacturer’s instructions. These ratings are intended as general guides only.

2: Sources of efficacy information: Aiello, D., Guarnaccia, V., Vitale, A., LeBlanc, N., Shishkoff, N., and Polizzi, G. 2022. Impact of Calonectria diseases on ornamental horticulture: diagnosis and control strategies. Plant Disease 106: 1773-87; Cinquerrui, A., Polizzi, G., Aiello, D., and Vital, A. 2016. Integrated management for the reduction of Calonectria infections in ornamental nurseries. Plant Disease 101: 165-169; LaMondia, J.A. 2014. Evaluation of fungicides for management of boxwood blight, Calonectria pseudonaviculata. Plant Disease 98: 99-102.

3: FRAC Group: classification based on fungicide mode of action (www.frac.info). Rotate any fungicide at risk of resistance development with products that have a different FRAC group. FRAC groups that start with M are multi-site contact fungicides and are low risk for resistance development.

References‌

Aiello, D., Guarnaccia, V., Vitale, A., LeBlanc, N., Shishkoff, N., and Polizzi, G. 2022. “Impact of Calonectria diseases on ornamental horticulture: diagnosis and control strategies.” Plant Disease 106: 1773-87

Cinquerrui, A., Polizzi, G., Aiello, D., and Vital, A. 2016. “Integrated management for the reduction of Calonectria infections in ornamental nurseries.” Plant Disease 101: 165-169

Kaderabek, L. E., Jackson, B.E., and Fonteno, B. 2017. “Pine bark handling and aging, effects on substrate chemical properties.” American Nurseryman, August: 20-23

Niemiera, A. X. 2024. “Nandina, heavenly bamboo (Nandina domestica).” VCE Publications: 2901- 1058

Diagnosing This and Other Plant Diseases

The Virginia Tech Plant Disease Clinic can test for this and other plant diseases. The whole plant should be sent as a sample if possible. If the plant is containerized, include fallen leaves and potting media. Refer to the Plant Disease Clinic website (https://bit.ly/VTplantclinic) for the current diagnostic form, fees, and instructions on collecting an appropriate diagnostic sample and submitting samples to the Plant Disease Clinic.

https://bit.ly/VTplantclinic

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Publication Date

March 6, 2026